Yes we had some server maintenance issues yesterday :-( sorry about that.
There are no scripted "apps" (E.g. You can't make an application out of
script) You can have an application that uses the scripting engines to
manipulate it - (IE and the Web server for instance) How the scripting plugs
into such apps and what you need to do depends on the hosting application.
It is possible to create a Windows Script host type of application that can
run script code - but that does not exist "out of the box" for Windows CE.
Keep in mind there is virtually no support for debugging script code either.
In general I think you'd be much better off looking at a different
solution - such as the Compact Framework.