Yes, you will. Here is how you can maintain the Win2000
boot option:
1. Save the hidden files c:\boot.ini, c:\ntldr & c:\ntdetect.com
to drive D:.
2. Get a free copy of bootpart.exe from
http://ourworld.compuserve.com/homepages/gvollant/bootpart.htm
3. Format drive C: and reload Win98.
4. Boot into Win98
5. Restore the files you saved in Step 1.
6. Do a clean boot (press F8) and run this command:
bootpart winnt boot:c:
You have now restored the Win2000 boot sector.
7. Run this command:
bootpart win95 c:\win98.sys "Windows 98"
You have now created a Windows boot sector file. You have
also added a "Windows 98" boot item to boot.ini
8. Hide the following files so that you do not delete them by
accident:
c:\boot.ini
c:\ntldr
c:\ntdetect.com
c:\win98.sys