Diskeeper isn't really designed to consolidate free space. It does have an
Improved Free Space consolidation mode, but it's not really effective. They
seem to feel that free space consolidation doesn't do much to improve
performance - which from a file read perspective makes sense -f rom a write
perspective it doesn't. However, what free space consolidation does gain
you is the ability for the file system to create new files contiguously
(they are not immediately created fragmented). In addition, if the free
space is highly fragmented it can cause slow down in new file creation.
Allowing new files to be created contiguously also means that you don't have
to defrag as often
The MFT Reserved Zone size can flucuate because under Windows 2000 the MFT
Reserved Zone is dynamically created every time the drive is mounted. By
default, it is 12.5% of the drive but it can be less if the file system
decides to store files inside of the Reserved Zone (it will try to avoid
this unless you get into a low free space condition). Under NT4, it is
always 12.5% of the drive.
- Greg/Raxco Software
Microsoft MVP - Windows Storage Management/File System
Disclaimer: I work for Raxco Software, the maker of PerfectDisk - a
commercial defrag utility, as a systems engineer in the support department.