If the entries listed under HIstory show Permit or Deny, then the actions
were the result of real time protection. If you said (or WD defaulted to)
Permit, then when the action is detected again, you will have another
opportunity to Permit or Deny. If you indicated Deny, then WD (Windows
Defender) took some form of action. Usually, WD prevents a change to the
registry or prevents a change to the drivers. In some circumstances, WD
would delete the offending routine (at least it did under the beta) and
undoing that would probably require a System Restore. In the case of a
manual or automatic scan, if WD spotted a suspected malicious piece of
software you would be be given the opportunity (assuming you didn't specifiy
that WD should take default actions) to specify Allow (which means Ignore),
Quarantine, Remove, or Always Allow. Always allow means to put the software
in the Allowed Items list and to basically Ignore it everytime you do a scan.
You can remove the entry from the Allowed Items list and it will be eligible
for scanning again. I hope that answers you question. Please feel free to
post again if you need additional clarification.